Bioinformatics (Fall 2020)

 

 

Syllabus

 

Reference 1: An introduction to Bioinformatics algorithms

Reference 2: Computational Biology: Genomes, Networks, Evolution, MIT, 2016

Reference 3: Theoretical Biology and Bioinformatics, Utrecht University, 2020

 

Handouts

  • Session 1 (A biology primer for computer scientists)
  • Session 2 (Dynamic Prog. -Sequence Alignment)
  • Session 3 (Clustering - Microarray)
  • Session 4 (Graph Algorithms - DNA Sequencing)
  • Session 5 (Phylogeny - Molecular Evolution)
  • Session 6 (RNA Structure Prediction)
  • Session 7 (A computational review on Biological networks)
  

Homework (new)

Refer to the following link and read the instructions carefully and answer the questions sequentially: https://teaching.healthtech.dtu.dk/22111/index.php/Exercise:_BLAST
You should upload your answer sheet in a single pdf or doc file in VClass website. Teamwork is not permitted, please do the assignment individually. Please consider the delivery deadline.

Useful links